PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT15410
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 265aa    MW: 28727.8 Da    PI: 8.5653
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT15410genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY54.72.1e-1770136259
               --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE......-SSSTTEEEEEEES--SS- CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkver......saedpkvveitYegeHnhe 59 
               +Dgy+WrKYGqK +  + fpr YYrC ++   +Cp++k v++      s+ d+++ ++tY  eH+++
  EMT15410  70 SDGYQWRKYGQKRIMRTSFPRCYYRCCYHrerSCPATKLVQQqpqqqhSDGDQTMYTVTYVHEHTCH 136
               7**************************998999******9872222224558899*********996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.7E-2160137IPR003657WRKY domain
SuperFamilySSF1182906.54E-1963136IPR003657WRKY domain
PROSITE profilePS5081115.26264136IPR003657WRKY domain
SMARTSM007749.7E-2569137IPR003657WRKY domain
PfamPF031061.1E-2071136IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    Send to blast
MEAGSATSGR LKRTWFLFLF GRWNSRSIDN GVGGQLARQH NSRTMQTQSR LIMNPNGGVA  60
RVTVTSSPYS DGYQWRKYGQ KRIMRTSFPR CYYRCCYHRE RSCPATKLVQ QQPQQQHSDG  120
DQTMYTVTYV HEHTCHNMAP AEPEAAARSS TPGPLGFSAG LQPRQQQRGG AGLDRGSKEE  180
LERQALVSSL ACVLQGHHQS YPGSGAGTPD GSPSHGRAGD GPSASGLSLD TSDDLGLDIM  240
DYGVTDALYF AASSSYGPGG DGMIP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004970387.14e-40PREDICTED: probable WRKY transcription factor 4
TrEMBLN1R0E60.0N1R0E6_AEGTA; Putative WRKY transcription factor 53
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP125382837
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40750.13e-09WRKY DNA-binding protein 54